Keto Low Carb Gluten Free Carrot Cake Cupcakes

Prep: 15 minCook: 25 min12 cupcakesmediumAmerican
Low Carb Gluten Free Carrot Cake Cupcakes with Cream Cheese

Moist and spiced carrot cupcakes made with coconut flour and sweetened with monk fruit, delivering all the classic carrot cake flavors without gluten or nuts. These tender cupcakes feature real shredded carrots and warm allspice, topped with rich cream cheese frosting. Perfect for those following keto, low-carb, or gluten-free lifestyles who don't want to miss out on dessert. The combination of coconut flour and flaxseed creates a surprisingly cake-like texture that rivals traditional versions.

Ingredients

Yield: 12 cupcakes
  • 4 eggs
  • ½ cup heavy cream
  • ¼ cup avocado oil
    melted coconut oil1:1ketodairy-free

    solidifies when cold

    Full guide →
  • 1 tsp lemon juice
  • 1 tsp vanilla liquid stevia
  • ½ cup coconut flour
    almond flour1:1gluten-freeketo

    different texture, nuttier flavor

    Full guide →
  • ½ cup carrot, shredded
  • ½ cup coconut, shredded, unsweetened
    almond flour1:1gluten-freeketo

    different texture, nuttier flavor

    Full guide →
  • ¼ cup ground flaxseed
  • ½ cup Monk Fruit/Allulose blend
  • ½ tsp allspice
  • ½ tsp baking powder
  • ½ tsp baking soda
  • ½ tsp salt
  • 12 oz cream cheese, softened or mascarpone cheese
    coconut cream1:1dairy-freevegandairy-free

    thinner frosting consistency

    Full guide →
  • cup heavy cream
  • salt
  • 1 tablespoon yacon syrup(optional)

Instructions

  1. 1

    Preheat oven to 350 degrees

  2. 2

    Place eggs, heavy cream, avocado oil, lemon juice, and vanilla stevia into stand mixer and blend until combined

  3. 3

    Add coconut flour, shredded carrot, shredded coconut, ground flaxseed, monk fruit blend, allspice, baking powder, baking soda, and salt and blend until combined

  4. 4

    Pour batter into greased or paper lined 12 capacity muffin pan

  5. 5

    Bake for 23-25 minutes or until toothpick in center comes out clean and cupcakes are golden brown

  6. 6

    Allow to cool 1 hour before frosting

  7. 7

    Prepare frosting by adding cream cheese, heavy cream, salt, and yacon syrup into stand mixer

  8. 8

    Taste and adjust sweetener if needed

  9. 9

    Decorate each cupcake

  10. 10

    Keep refrigerated until serving

Tips

Tip 1

Let cupcakes cool completely before frosting to prevent melting and sliding.

Tip 2

Squeeze excess moisture from shredded carrots with paper towels for better texture.

Tip 3

Store frosted cupcakes in refrigerator as cream cheese frosting needs to stay cold.

Good to Know

Storage

refrigerate frosted cupcakes up to 3 days in airtight container

Make Ahead

cupcakes can be baked 1 day ahead and frosted before serving

Serve With

serve chilled directly from refrigerator

Common Mistakes

Watch

measure coconut flour carefully to avoid dense cupcakes

Watch

don't overmix batter to prevent tough texture

Watch

ensure cream cheese is fully softened for smooth frosting

Substitutions

Dairy-Free Swaps

avocado oil
melted coconut oil1:1ketodairy-free

solidifies when cold

Full guide →
cream cheese
coconut cream1:1dairy-freevegandairy-free

thinner frosting consistency

Full guide →

Gluten-Free Swaps

coconut flour
almond flour1:1gluten-freeketo

different texture, nuttier flavor

Full guide →

General Alternatives

monk fruit blend
erythritol1:1ketosugar-free

may have cooling aftertaste

Full guide →
Find more substitutions →

FAQ

Can I use regular sugar instead of monk fruit?

Yes, use 1/2 cup granulated sugar but this will no longer be low carb and will increase the carb content significantly.

What if I don't have liquid stevia?

Replace with 2-3 tablespoons of your preferred powdered sweetener, adjusting to taste in the final batter.

How long do these cupcakes keep?

Store frosted cupcakes in the refrigerator for up to 3 days in an airtight container for best quality.